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  5. LOC_Os06g50840.1

LOC_Os06g50840.1


Description : RING/FYVE/PHD zinc finger superfamily protein


Gene families : OG_01_0000473 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000473_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g50840.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g50840.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_352
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_34


Type GO Term Name Evidence Source
BP GO:0036258 multivesicular body assembly ISM GOs from InterProScan
MF GO:0043130 ubiquitin binding ISM GOs from InterProScan
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000306 Znf_FYVE SMART 332 401
IPR013083 Znf_RING/FYVE/PHD Gene3D 326 413
IPR000306 Znf_FYVE Pfam 336 400
IPR017455 Znf_FYVE-rel ProSiteProfiles 340 400
IPR011011 Znf_FYVE_PHD SUPERFAMILY 335 405
IPR045893 FREE1 PANTHER 114 487

No CAZYmes available for this sequence

No external refs found!