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  5. LOC_Os06g50910.3

LOC_Os06g50910.3


Description : Ataxia telangiectasia-mutated and RAD3-related


Gene families : OG_01_0005132 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005132_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g50910.3
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g50910.3
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_199
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_32


Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
MF GO:0016301 kinase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR018936 PI3/4_kinase_CS ProSitePatterns 2476 2496
IPR003152 FATC_dom Pfam 2622 2653
IPR014009 PIK_FAT ProSiteProfiles 1590 2200
IPR003152 FATC_dom ProSiteProfiles 2621 2653
IPR000403 PI3/4_kinase_cat_dom ProSiteProfiles 2337 2653
IPR000403 PI3/4_kinase_cat_dom SMART 2338 2642
IPR000403 PI3/4_kinase_cat_dom Pfam 2338 2582
IPR016024 ARM-type_fold SUPERFAMILY 270 1540
IPR011009 Kinase-like_dom_sf SUPERFAMILY 2253 2585
IPR003152 FATC_dom SMART 2621 2653
IPR011990 TPR-like_helical_dom_sf Gene3D 1571 2054
IPR012993 UME Pfam 1058 1158
IPR012993 UME SMART 1055 1161
IPR036940 PI3/4_kinase_cat_sf Gene3D 2449 2613
IPR003151 PIK-rel_kinase_FAT Pfam 1735 2110

No CAZYmes available for this sequence

No external refs found!