LOC_Os06g51490.1

Description : transcription factor jumonji (jmjC) domain-containing protein

Gene families : OG_01_0016525 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0016525_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g51490.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g51490.1	No neighbors in network
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_178

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0034708	methyltransferase complex	None	Extended
CC	GO:0035097	histone methyltransferase complex	None	Extended
CC	GO:0048188	Set1C/COMPASS complex	ISM	GOs from InterProScan
CC	GO:0140513	nuclear protein-containing complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR019787	Znf_PHD-finger	ProSiteProfiles	148	195
IPR037869	Spp1/CFP1	PANTHER	52	200
IPR019787	Znf_PHD-finger	Pfam	150	194
IPR001965	Znf_PHD	SMART	150	193
IPR011011	Znf_FYVE_PHD	SUPERFAMILY	138	193
IPR013083	Znf_RING/FYVE/PHD	Gene3D	133	194
IPR019786	Zinc_finger_PHD-type_CS	ProSitePatterns	151	192

No CAZYmes available for this sequence

External Links

No external refs found!