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  5. LOC_Os07g01110.1

LOC_Os07g01110.1


Description : laccase 7


Gene families : OG_01_0001268 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001268_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g01110.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g01110.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_290
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_119


Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding ISM GOs from InterProScan
MF GO:0016491 oxidoreductase activity ISM GOs from InterProScan
BP GO:0046274 lignin catabolic process ISM GOs from InterProScan
CC GO:0048046 apoplast ISM GOs from InterProScan
MF GO:0052716 hydroquinone:oxygen oxidoreductase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR045087 Cu-oxidase_fam PANTHER 9 583
IPR008972 Cupredoxin SUPERFAMILY 163 353
IPR008972 Cupredoxin SUPERFAMILY 30 180
IPR011707 Cu-oxidase-like_N Pfam 42 156
IPR002355 Cu_oxidase_Cu_BS ProSitePatterns 546 557
IPR008972 Cupredoxin Gene3D 381 583
IPR001117 Cu-oxidase_2nd Pfam 169 318
IPR017761 Laccase TIGRFAM 31 583
IPR008972 Cupredoxin Gene3D 19 155
IPR008972 Cupredoxin SUPERFAMILY 365 583
IPR034285 CuRO_2_LCC CDD 170 317
IPR034289 CuRO_3_LCC CDD 422 566
IPR008972 Cupredoxin Gene3D 167 356
IPR011706 Cu-oxidase_C Pfam 427 565
IPR034288 CuRO_1_LCC CDD 35 155
HMM Family HMM Length Query Length e-Value Query Start Query End
AA1 358 584 1.6e-116 50 558
No external refs found!