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  5. LOC_Os07g01770.1

LOC_Os07g01770.1


Description : Calcium-dependent lipid-binding (CaLB domain) family protein


Gene families : OG_01_0047218 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0047218_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g01770.1 No neighbors in network
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g01770.1
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_6


Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000008 C2_dom SMART 7 102
IPR000008 C2_dom SMART 389 488
IPR035892 C2_domain_sf SUPERFAMILY 423 544
IPR044562 CAR1-11 PANTHER 423 547
IPR044562 CAR1-11 PANTHER 2 161
IPR035892 C2_domain_sf Gene3D 405 548
IPR001223 Glyco_hydro18_cat Pfam 221 357
IPR000008 C2_dom ProSiteProfiles 370 490
IPR035892 C2_domain_sf Gene3D 5 163
IPR000008 C2_dom Pfam 8 95
IPR000008 C2_dom Pfam 420 479
IPR001223 Glyco_hydro18_cat ProSiteProfiles 218 549
IPR000008 C2_dom ProSiteProfiles 1 103
IPR035892 C2_domain_sf SUPERFAMILY 5 100
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 215 362
HMM Family HMM Length Query Length e-Value Query Start Query End
GH18 296 550 9.3e-09 221 357
No external refs found!