LOC_Os07g06190.1

Description : NRAMP metal ion transporter family protein

Gene families : OG_01_0004134 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004134_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g06190.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_4

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004601	peroxidase activity	ISM	GOs from InterProScan
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006979	response to oxidative stress	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	ISM	GOs from InterProScan
MF	GO:0016209	antioxidant activity	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	None	Extended
MF	GO:0020037	heme binding	ISM	GOs from InterProScan
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	ISM	GOs from InterProScan
BP	GO:0042743	hydrogen peroxide metabolic process	None	Extended
BP	GO:0042744	hydrogen peroxide catabolic process	ISM	GOs from InterProScan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
MF	GO:0046873	metal ion transmembrane transporter activity	ISM	GOs from InterProScan
MF	GO:0046906	tetrapyrrole binding	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072593	reactive oxygen species metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002016	Haem_peroxidase	Pfam	42	276
IPR002016	Haem_peroxidase	ProSiteProfiles	21	315
IPR001046	NRAMP_fam	PANTHER	987	1271
IPR001046	NRAMP_fam	PANTHER	296	754
IPR019794	Peroxidases_AS	ProSitePatterns	53	64
IPR001046	NRAMP_fam	Pfam	268	583
IPR010255	Haem_peroxidase_sf	SUPERFAMILY	22	308
IPR002016	Haem_peroxidase	PRINTS	53	67
IPR002016	Haem_peroxidase	PRINTS	112	129
IPR002016	Haem_peroxidase	PRINTS	234	249
IPR002016	Haem_peroxidase	PRINTS	130	142
IPR002016	Haem_peroxidase	PRINTS	178	193
IPR033905	Secretory_peroxidase	CDD	22	307
IPR019793	Peroxidases_heam-ligand_BS	ProSitePatterns	178	188
IPR000823	Peroxidase_pln	PRINTS	31	50
IPR000823	Peroxidase_pln	PRINTS	177	189
IPR000823	Peroxidase_pln	PRINTS	55	75
IPR000823	Peroxidase_pln	PRINTS	248	265
IPR000823	Peroxidase_pln	PRINTS	130	145
IPR000823	Peroxidase_pln	PRINTS	92	105
IPR000823	Peroxidase_pln	PRINTS	289	302
IPR000823	Peroxidase_pln	PRINTS	111	121
IPR000823	Peroxidase_pln	PRINTS	232	247

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
AA2	255	1368	6.9e-44	48	296

External Links

No external refs found!

LOC_Os07g06190.1

Expression Profile

Co-expression Networks

Functional Annotation