Sevir.4G269200.1

Description : ribonuclease Ps

Gene families : OG_01_0006082 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006082_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.4G269200.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.4G269200.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_215
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_27

Type	GO Term	Name	Evidence	Source
CC	GO:0000172	ribonuclease MRP complex	ISM	GOs from InterProScan
BP	GO:0000966	RNA 5'-end processing	None	Extended
BP	GO:0001682	tRNA 5'-leader removal	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005655	nucleolar ribonuclease P complex	ISM	GOs from InterProScan
CC	GO:0005732	sno(s)RNA-containing ribonucleoprotein complex	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
CC	GO:0030677	ribonuclease P complex	None	Extended
CC	GO:0030681	multimeric ribonuclease P complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034471	ncRNA 5'-end processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0099116	tRNA 5'-end processing	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1902555	endoribonuclease complex	None	Extended
CC	GO:1905348	endonuclease complex	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR009723	Pop1_N	Pfam	117	174
IPR039182	Pop1	PANTHER	4	848
IPR012590	POPLD_dom	Pfam	512	588

No CAZYmes available for this sequence

External Links

No external refs found!

Sevir.4G269200.1

Expression Profile

Co-expression Networks

Functional Annotation