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  5. LOC_Os07g08950.1

LOC_Os07g08950.1


Description : FAD-linked oxidases family protein


Gene families : OG_01_0001112 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001112_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g08950.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g08950.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_368
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_139


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0016491 oxidoreductase activity ISM GOs from InterProScan
MF GO:0050660 flavin adenine dinucleotide binding ISM GOs from InterProScan
MF GO:0071949 FAD binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036318 FAD-bd_PCMH-like_sf SUPERFAMILY 99 306
IPR016171 Vanillyl_alc_oxidase_C-sub2 Gene3D 514 554
IPR016164 FAD-linked_Oxase-like_C SUPERFAMILY 314 555
IPR016167 FAD-bd_PCMH_sub1 Gene3D 86 186
IPR004113 FAD-bd_oxidored_4_C Pfam 313 553
IPR016169 FAD-bd_PCMH_sub2 Gene3D 189 308
IPR006094 Oxid_FAD_bind_N Pfam 137 272
IPR016166 FAD-bd_PCMH ProSiteProfiles 131 310
HMM Family HMM Length Query Length e-Value Query Start Query End
AA4 522 560 6.3e-19 102 273
No external refs found!