LOC_Os07g12240.1

Description : EF hand calcium-binding protein family

Gene families : OG_01_0018832 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0018832_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g12240.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g12240.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_365
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_78

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011992	EF-hand-dom_pair	SUPERFAMILY	77	147
IPR018247	EF_Hand_1_Ca_BS	ProSitePatterns	130	142
IPR018247	EF_Hand_1_Ca_BS	ProSitePatterns	92	104
IPR002048	EF_hand_dom	SMART	121	149
IPR002048	EF_hand_dom	SMART	83	111
IPR002048	EF_hand_dom	Pfam	83	147
IPR002048	EF_hand_dom	CDD	83	146
IPR002048	EF_hand_dom	ProSiteProfiles	117	150
IPR002048	EF_hand_dom	ProSiteProfiles	79	114

No CAZYmes available for this sequence

External Links

No external refs found!