LOC_Os07g14830.1

Description : Transducin/WD40 repeat-like superfamily protein

Gene families : OG_01_0004802 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004802_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g14830.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g14830.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_321
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_594

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016226	iron-sulfur cluster assembly	ISM	GOs from InterProScan
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0031163	metallo-sulfur cluster assembly	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0097361	CIA complex	ISM	GOs from InterProScan
CC	GO:0140535	intracellular protein-containing complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR019775	WD40_repeat_CS	ProSitePatterns	333	347
IPR028608	CIAO1/Cia1	PANTHER	6	347
IPR001680	WD40_rpt	Pfam	314	345
IPR001680	WD40_rpt	Pfam	15	54
IPR001680	WD40_rpt	Pfam	107	143
IPR001680	WD40_rpt	Pfam	152	188
IPR001680	WD40_rpt	Pfam	61	99
IPR001680	WD40_rpt	Pfam	197	239
IPR001680	WD40_rpt	ProSiteProfiles	112	153
IPR036322	WD40_repeat_dom_sf	SUPERFAMILY	14	345
IPR019775	WD40_repeat_CS	ProSitePatterns	131	145
IPR001680	WD40_rpt	ProSiteProfiles	157	188
IPR020472	G-protein_beta_WD-40_rep	PRINTS	333	347
IPR020472	G-protein_beta_WD-40_rep	PRINTS	226	240
IPR020472	G-protein_beta_WD-40_rep	PRINTS	131	145
IPR015943	WD40/YVTN_repeat-like_dom_sf	Gene3D	8	351
IPR001680	WD40_rpt	ProSiteProfiles	207	239
IPR001680	WD40_rpt	ProSiteProfiles	313	353
IPR001680	WD40_rpt	ProSiteProfiles	17	54
IPR001680	WD40_rpt	SMART	10	54
IPR001680	WD40_rpt	SMART	255	294
IPR001680	WD40_rpt	SMART	60	100
IPR001680	WD40_rpt	SMART	105	144
IPR001680	WD40_rpt	SMART	305	346
IPR001680	WD40_rpt	SMART	195	239
IPR001680	WD40_rpt	SMART	150	189
IPR001680	WD40_rpt	ProSiteProfiles	68	100
IPR028608	CIAO1/Cia1	Hamap	9	349

No CAZYmes available for this sequence

External Links

No external refs found!