Sevir.4G274500.1

Description : SKU5 similar 5

Gene families : OG_01_0002715 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002715_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.4G274500.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.4G274500.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_31
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_138

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005507	copper ion binding	ISM	GOs from InterProScan
MF	GO:0016491	oxidoreductase activity	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001117	Cu-oxidase_2nd	Pfam	168	305
IPR034273	CuRO_1_AAO-like	CDD	37	152
IPR008972	Cupredoxin	SUPERFAMILY	352	541
IPR008972	Cupredoxin	Gene3D	166	340
IPR008972	Cupredoxin	SUPERFAMILY	164	342
IPR008972	Cupredoxin	Gene3D	35	156
IPR011707	Cu-oxidase-like_N	Pfam	44	155
IPR008972	Cupredoxin	Gene3D	351	546
IPR045087	Cu-oxidase_fam	PANTHER	14	543
IPR008972	Cupredoxin	SUPERFAMILY	28	182
IPR011706	Cu-oxidase_C	Pfam	411	521

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
AA1	358	551	2.7e-66	52	503

External Links

No external refs found!