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  5. Sevir.4G274600.1

Sevir.4G274600.1


Description : binding


Gene families : OG_01_0000390 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000390_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.4G274600.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_184


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011993 PH-like_dom_sf Gene3D 2351 2490
IPR023362 PH-BEACH_dom CDD 2352 2497
IPR000409 BEACH_dom ProSiteProfiles 2518 2808
IPR023362 PH-BEACH_dom ProSiteProfiles 2348 2494
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 2919 3175
IPR000409 BEACH_dom CDD 2533 2808
IPR013320 ConA-like_dom_sf SUPERFAMILY 1053 1241
IPR001680 WD40_rpt Pfam 3008 3041
IPR001680 WD40_rpt Pfam 2944 2979
IPR031570 NBEA/BDCP_DUF4704 Pfam 1295 1569
IPR016024 ARM-type_fold SUPERFAMILY 753 1023
IPR036372 BEACH_dom_sf SUPERFAMILY 2511 2808
IPR000409 BEACH_dom Pfam 2533 2808
IPR023362 PH-BEACH_dom Pfam 2359 2490
IPR001680 WD40_rpt ProSiteProfiles 2948 2989
IPR011989 ARM-like Gene3D 786 1055
IPR000409 BEACH_dom SMART 2530 2808
IPR036372 BEACH_dom_sf Gene3D 2521 2808
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 2907 3170
IPR001680 WD40_rpt SMART 3006 3045
IPR001680 WD40_rpt SMART 3131 3169
IPR001680 WD40_rpt SMART 2941 2980
IPR001680 WD40_rpt SMART 3090 3128

No CAZYmes available for this sequence

No external refs found!