LOC_Os07g20170.1

Description : actin depolymerizing factor 6

Gene families : OG_01_0009812 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009812_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g20170.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g20170.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_191
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_16

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003779	actin binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005856	cytoskeleton	None	Extended
BP	GO:0007015	actin filament organization	None	Extended
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008154	actin polymerization or depolymerization	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0015629	actin cytoskeleton	ISM	GOs from InterProScan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022411	cellular component disassembly	None	Extended
BP	GO:0030042	actin filament depolymerization	ISM	GOs from InterProScan
BP	GO:0032984	protein-containing complex disassembly	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0051261	protein depolymerization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR017904	ADF/Cofilin	CDD	17	143
IPR002108	ADF-H	Pfam	24	140
IPR002108	ADF-H	SMART	21	144
IPR017904	ADF/Cofilin	PANTHER	12	144
IPR002108	ADF-H	ProSiteProfiles	14	144
IPR029006	ADF-H/Gelsolin-like_dom_sf	Gene3D	16	144

No CAZYmes available for this sequence

External Links

No external refs found!