LOC_Os07g22600.1

Description : spermidine synthase 1

Gene families : OG_01_0014935 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014935_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g22600.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g22600.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_23
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_19

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISM	GOs from InterProScan
BP	GO:0006576	biogenic amine metabolic process	None	Extended
BP	GO:0006595	polyamine metabolic process	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009308	amine metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001045	Spermi_synthase	TIGRFAM	34	313
IPR035246	Spermidine_synt_N	Pfam	33	87
IPR030374	PABS	ProSiteProfiles	32	269
IPR001045	Spermi_synthase	Hamap	33	319
IPR037163	Spermidine_synt_N_sf	Gene3D	26	84
IPR030373	PABS_CS	ProSitePatterns	111	124
IPR029063	SAM-dependent_MTases_sf	SUPERFAMILY	30	318
IPR030668	Spermi_synthase_euk	PIRSF	22	323
IPR001045	Spermi_synthase	PANTHER	21	323

No CAZYmes available for this sequence

External Links

No external refs found!