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  5. LOC_Os07g22850.1

LOC_Os07g22850.1


Description : Chalcone and stilbene synthase family protein


Gene families : OG_01_0028356 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0028356_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g22850.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g22850.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_94
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_44


Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process ISM GOs from InterProScan
MF GO:0016746 acyltransferase activity ISM GOs from InterProScan
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012328 Chalcone/stilbene_synt_C Pfam 267 421
IPR016039 Thiolase-like SUPERFAMILY 264 419
IPR001099 Chalcone/stilbene_synt_N Pfam 86 258
IPR001099 Chalcone/stilbene_synt_N Pfam 15 67
IPR011141 Polyketide_synthase_type-III PANTHER 17 67
IPR016039 Thiolase-like SUPERFAMILY 19 261
IPR016039 Thiolase-like Gene3D 265 420
IPR011141 Polyketide_synthase_type-III PIRSF 79 423
IPR011141 Polyketide_synthase_type-III PIRSF 9 69
IPR016039 Thiolase-like Gene3D 2 264
IPR011141 Polyketide_synthase_type-III PANTHER 88 422

No CAZYmes available for this sequence

No external refs found!