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  5. LOC_Os07g23470.1

LOC_Os07g23470.1


Description : Pathogenesis-related thaumatin superfamily protein


Gene families : OG_01_0020745 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0020745_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g23470.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g23470.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_384
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_182


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001938 Thaumatin ProSiteProfiles 26 249
IPR001938 Thaumatin PRINTS 28 40
IPR001938 Thaumatin PRINTS 77 88
IPR001938 Thaumatin PRINTS 239 248
IPR001938 Thaumatin PRINTS 131 147
IPR001938 Thaumatin Pfam 33 249
IPR037176 Osmotin/thaumatin-like_sf Gene3D 27 249
IPR037176 Osmotin/thaumatin-like_sf SUPERFAMILY 28 249
IPR001938 Thaumatin PIRSF 1 249
IPR001938 Thaumatin PANTHER 4 249
IPR001938 Thaumatin SMART 29 249
HMM Family HMM Length Query Length e-Value Query Start Query End
GH152 216 250 2e-83 33 249
No external refs found!