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  5. LOC_Os07g23944.1

LOC_Os07g23944.1


Description : heteroglycan glucosidase 1


Gene families : OG_01_0006447 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006447_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g23944.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g23944.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_70
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_172


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
MF GO:0030246 carbohydrate binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013780 Glyco_hydro_b Gene3D 593 726
IPR013780 Glyco_hydro_b Gene3D 505 589
IPR000322 Glyco_hydro_31_TIM Pfam 167 596
IPR011013 Gal_mutarotase_sf_dom SUPERFAMILY 9 152
IPR025887 Glyco_hydro_31_N_dom Pfam 77 143
IPR030458 Glyco_hydro_31_AS ProSitePatterns 331 338
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 172 521
IPR033403 DUF5110 Pfam 614 681
HMM Family HMM Length Query Length e-Value Query Start Query End
GH31 427 981 1.1e-135 167 579
No external refs found!