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  5. LOC_Os07g26490.1

LOC_Os07g26490.1


Description : XB3 ortholog 5 in Arabidopsis thaliana


Gene families : OG_01_0004723 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004723_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g26490.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g26490.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_11
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_9


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002110 Ankyrin_rpt Pfam 60 116
IPR002110 Ankyrin_rpt SMART 108 136
IPR002110 Ankyrin_rpt SMART 39 69
IPR002110 Ankyrin_rpt SMART 75 104
IPR002110 Ankyrin_rpt ProSiteProfiles 39 72
IPR036770 Ankyrin_rpt-contain_sf Gene3D 5 142
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 12 128
IPR013083 Znf_RING/FYVE/PHD Gene3D 436 512
IPR001841 Znf_RING ProSiteProfiles 462 501
IPR001841 Znf_RING SMART 462 500
IPR002110 Ankyrin_rpt ProSiteProfiles 78 107

No CAZYmes available for this sequence

No external refs found!