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  5. LOC_Os07g26900.1

LOC_Os07g26900.1


Description : alpha-galactosidase 1


Gene families : OG_01_0015566 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015566_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g26900.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g26900.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_301
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_4


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002241 Glyco_hydro_27 CDD 2 168
IPR013780 Glyco_hydro_b Gene3D 171 262
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 2 169
IPR041233 Melibiase_C Pfam 181 259
IPR002241 Glyco_hydro_27 Pfam 2 168
IPR002241 Glyco_hydro_27 PANTHER 1 268
IPR002241 Glyco_hydro_27 PRINTS 124 145
IPR002241 Glyco_hydro_27 PRINTS 11 28
IPR002241 Glyco_hydro_27 PRINTS 38 56
IPR002241 Glyco_hydro_27 PRINTS 103 122
IPR013785 Aldolase_TIM Gene3D 1 170
HMM Family HMM Length Query Length e-Value Query Start Query End
GH27 229 271 2.5e-90 2 235
No external refs found!