- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : calmodulin binding;transcription regulators
Gene families : OG_01_0002584 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002584_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g30774.1 | |
| Neighborhood | Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g30774.1 | |
| Cluster | Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_178 | |
| Cluster | Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_138 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | ISM | GOs from InterProScan |
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR036770 | Ankyrin_rpt-contain_sf | SUPERFAMILY | 550 | 674 |
| IPR027417 | P-loop_NTPase | SUPERFAMILY | 725 | 826 |
| IPR005559 | CG-1_dom | ProSiteProfiles | 26 | 152 |
| IPR000048 | IQ_motif_EF-hand-BS | ProSiteProfiles | 799 | 823 |
| IPR014756 | Ig_E-set | SUPERFAMILY | 375 | 461 |
| IPR000048 | IQ_motif_EF-hand-BS | ProSiteProfiles | 883 | 911 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 609 | 641 |
| IPR005559 | CG-1_dom | SMART | 29 | 147 |
| IPR036770 | Ankyrin_rpt-contain_sf | Gene3D | 541 | 682 |
| IPR002110 | Ankyrin_rpt | Pfam | 582 | 672 |
| IPR000048 | IQ_motif_EF-hand-BS | Pfam | 801 | 820 |
| IPR000048 | IQ_motif_EF-hand-BS | Pfam | 884 | 903 |
| IPR000048 | IQ_motif_EF-hand-BS | Pfam | 778 | 796 |
| IPR002110 | Ankyrin_rpt | SMART | 609 | 638 |
| IPR002110 | Ankyrin_rpt | SMART | 648 | 677 |
| IPR005559 | CG-1_dom | Pfam | 33 | 145 |
| IPR013783 | Ig-like_fold | Gene3D | 369 | 465 |
| IPR000048 | IQ_motif_EF-hand-BS | ProSiteProfiles | 760 | 786 |
| IPR000048 | IQ_motif_EF-hand-BS | SMART | 775 | 797 |
| IPR000048 | IQ_motif_EF-hand-BS | SMART | 798 | 820 |
| IPR000048 | IQ_motif_EF-hand-BS | SMART | 881 | 903 |
| IPR000048 | IQ_motif_EF-hand-BS | ProSiteProfiles | 776 | 803 |
No CAZYmes available for this sequence
| No external refs found! |