LOC_Os07g32350.1

Description : Transducin/WD40 repeat-like superfamily protein

Gene families : OG_01_0013024 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013024_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g32350.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g32350.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_60
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_33

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005730	nucleolus	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0022613	ribonucleoprotein complex biogenesis	None	Extended
BP	GO:0042273	ribosomal large subunit biogenesis	ISM	GOs from InterProScan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001680	WD40_rpt	SMART	209	246
IPR001680	WD40_rpt	SMART	292	332
IPR037379	WDR74/Nsa1	PANTHER	1	429
IPR019775	WD40_repeat_CS	ProSitePatterns	319	333
IPR001680	WD40_rpt	ProSiteProfiles	304	341
IPR011047	Quinoprotein_ADH-like_supfam	SUPERFAMILY	67	345
IPR015943	WD40/YVTN_repeat-like_dom_sf	Gene3D	128	432

No CAZYmes available for this sequence

External Links

No external refs found!