LOC_Os07g35940.1

Description : beta-amylase 5

Gene families : OG_01_0006399 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006399_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g35940.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g35940.1	No neighbors in network
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_224

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016161	beta-amylase activity	ISM	GOs from InterProScan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001371	Glyco_hydro_14B_pln	PRINTS	368	377
IPR001371	Glyco_hydro_14B_pln	PRINTS	326	336
IPR001371	Glyco_hydro_14B_pln	PRINTS	415	429
IPR001371	Glyco_hydro_14B_pln	PRINTS	170	179
IPR001371	Glyco_hydro_14B_pln	PRINTS	397	413
IPR001371	Glyco_hydro_14B_pln	PRINTS	382	391
IPR001371	Glyco_hydro_14B_pln	PRINTS	430	444
IPR001554	Glyco_hydro_14	Pfam	14	435
IPR018238	Glyco_hydro_14_CS	ProSitePatterns	180	190
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	6	485
IPR018238	Glyco_hydro_14_CS	ProSitePatterns	91	99
IPR001554	Glyco_hydro_14	PANTHER	3	484
IPR001554	Glyco_hydro_14	PRINTS	65	83
IPR001554	Glyco_hydro_14	PRINTS	360	382
IPR001554	Glyco_hydro_14	PRINTS	323	346
IPR001554	Glyco_hydro_14	PRINTS	305	316
IPR001554	Glyco_hydro_14	PRINTS	180	202
IPR001554	Glyco_hydro_14	PRINTS	44	58
IPR001554	Glyco_hydro_14	PRINTS	252	271
IPR001554	Glyco_hydro_14	PRINTS	288	304
IPR001554	Glyco_hydro_14	PRINTS	87	108

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
GH14	412	489	3.7e-188	14	432

External Links

No external refs found!