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  5. LOC_Os07g36450.1

LOC_Os07g36450.1


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0013311 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013311_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g36450.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g36450.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_382
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_584


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt TIGRFAM 185 211
IPR002885 Pentatricopeptide_rpt TIGRFAM 150 183
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 147 181
IPR044795 THA8L-like PANTHER 43 261
IPR002885 Pentatricopeptide_rpt Pfam 146 194
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 182 216
IPR011990 TPR-like_helical_dom_sf Gene3D 76 262

No CAZYmes available for this sequence

No external refs found!