LOC_Os07g37610.1

Description : HSI2-like 1

Gene families : OG_01_0002290 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002290_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g37610.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g37610.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_283
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_131

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR015300	DNA-bd_pseudobarrel_sf	Gene3D	431	557
IPR003340	B3_DNA-bd	Pfam	453	552
IPR003340	B3_DNA-bd	ProSiteProfiles	453	554
IPR013087	Znf_C2H2_type	ProSitePatterns	138	158
IPR011124	Znf_CW	ProSiteProfiles	708	758
IPR003340	B3_DNA-bd	CDD	451	552
IPR015300	DNA-bd_pseudobarrel_sf	SUPERFAMILY	450	552
IPR003340	B3_DNA-bd	SMART	453	553
IPR011124	Znf_CW	Pfam	713	756

No CAZYmes available for this sequence

External Links

No external refs found!