LOC_Os07g38300.1

Description : ribosome recycling factor, chloroplast precursor

Gene families : OG_01_0004630 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004630_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g38300.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g38300.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_147
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_159

Type	GO Term	Name	Evidence	Source
BP	GO:0006412	translation	ISM	GOs from InterProScan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002661	Ribosome_recyc_fac	Hamap	84	266
IPR023584	Ribosome_recyc_fac_dom	Pfam	102	264
IPR036191	RRF_sf	Gene3D	93	263
IPR036191	RRF_sf	SUPERFAMILY	86	265
IPR002661	Ribosome_recyc_fac	PANTHER	31	265
IPR002661	Ribosome_recyc_fac	CDD	86	264
IPR002661	Ribosome_recyc_fac	TIGRFAM	92	266

No CAZYmes available for this sequence

External Links

No external refs found!