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  5. LOC_Os07g38580.1

LOC_Os07g38580.1


Description : RING/FYVE/PHD zinc finger superfamily protein


Gene families : OG_01_0000473 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000473_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g38580.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g38580.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_369
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_1


Type GO Term Name Evidence Source
BP GO:0036258 multivesicular body assembly ISM GOs from InterProScan
MF GO:0043130 ubiquitin binding ISM GOs from InterProScan
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013083 Znf_RING/FYVE/PHD Gene3D 356 444
IPR017455 Znf_FYVE-rel ProSiteProfiles 370 430
IPR045893 FREE1 PANTHER 2 517
IPR000306 Znf_FYVE SMART 362 431
IPR000306 Znf_FYVE Pfam 366 430
IPR011011 Znf_FYVE_PHD SUPERFAMILY 365 439

No CAZYmes available for this sequence

No external refs found!