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  5. LOC_Os07g39350.1

LOC_Os07g39350.1


Description : polyol/monosaccharide transporter 5


Gene families : OG_01_0000095 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000095_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g39350.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g39350.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_87
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_203


Type GO Term Name Evidence Source
MF GO:0015144 carbohydrate transmembrane transporter activity ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
MF GO:0022857 transmembrane transporter activity ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR005829 Sugar_transporter_CS ProSitePatterns 187 212
IPR036259 MFS_trans_sf Gene3D 80 556
IPR036259 MFS_trans_sf SUPERFAMILY 82 549
IPR003663 Sugar/inositol_transpt TIGRFAM 74 548
IPR005828 MFS_sugar_transport-like Pfam 91 552
IPR003663 Sugar/inositol_transpt PRINTS 453 474
IPR003663 Sugar/inositol_transpt PRINTS 358 368
IPR003663 Sugar/inositol_transpt PRINTS 182 201
IPR003663 Sugar/inositol_transpt PRINTS 476 488
IPR003663 Sugar/inositol_transpt PRINTS 99 109
IPR005829 Sugar_transporter_CS ProSitePatterns 145 162
IPR020846 MFS_dom ProSiteProfiles 91 541
IPR045262 STP/PLT_plant PANTHER 75 567

No CAZYmes available for this sequence

No external refs found!