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  5. LOC_Os07g39950.1

LOC_Os07g39950.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0002543 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002543_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g39950.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_104


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 26 351
IPR001680 WD40_rpt Pfam 113 142
IPR001680 WD40_rpt Pfam 244 286
IPR001680 WD40_rpt Pfam 35 61
IPR001680 WD40_rpt ProSiteProfiles 261 286
IPR001680 WD40_rpt ProSiteProfiles 110 142
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 31 320
IPR001680 WD40_rpt SMART 21 61
IPR001680 WD40_rpt SMART 244 286
IPR001680 WD40_rpt SMART 289 339
IPR001680 WD40_rpt SMART 147 187
IPR001680 WD40_rpt SMART 103 142
IPR001680 WD40_rpt SMART 64 101

No CAZYmes available for this sequence

No external refs found!