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  5. LOC_Os07g42420.1

LOC_Os07g42420.1


Description : fatty acid biosynthesis 1


Gene families : OG_01_0002318 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002318_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g42420.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g42420.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_371
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_48


Type GO Term Name Evidence Source
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity ISM GOs from InterProScan
BP GO:0006633 fatty acid biosynthetic process ISM GOs from InterProScan
MF GO:0016746 acyltransferase activity ISM GOs from InterProScan
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000794 Beta-ketoacyl_synthase CDD 96 503
IPR014031 Ketoacyl_synth_C Pfam 349 463
IPR020841 PKS_Beta-ketoAc_synthase_dom SMART 98 497
IPR014030 Ketoacyl_synth_N Pfam 96 341
IPR016039 Thiolase-like SUPERFAMILY 309 504
IPR016039 Thiolase-like Gene3D 71 507
IPR000794 Beta-ketoacyl_synthase PANTHER 56 507
IPR018201 Ketoacyl_synth_AS ProSitePatterns 249 265
IPR016039 Thiolase-like SUPERFAMILY 96 346
IPR017568 3-oxoacyl-ACP_synth-2 TIGRFAM 96 503

No CAZYmes available for this sequence

No external refs found!