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  5. LOC_Os07g43810.1

LOC_Os07g43810.1


Description : chloroplast RNA-binding protein 29


Gene families : OG_01_0006373 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006373_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g43810.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g43810.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_294
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_17


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000504 RRM_dom ProSiteProfiles 180 258
IPR035979 RBD_domain_sf SUPERFAMILY 78 176
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 159 264
IPR000504 RRM_dom SMART 81 154
IPR000504 RRM_dom SMART 181 254
IPR000504 RRM_dom Pfam 82 152
IPR000504 RRM_dom Pfam 182 252
IPR035979 RBD_domain_sf SUPERFAMILY 176 263
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 54 155
IPR000504 RRM_dom ProSiteProfiles 80 158

No CAZYmes available for this sequence

No external refs found!