LOC_Os07g44820.1

Description : Transcription elongation factor (TFIIS) family protein

Gene families : OG_01_0003885 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003885_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g44820.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g44820.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_24
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_138

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	GOs from InterProScan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003617	TFIIS/CRSP70_N_sub	SMART	117	192
IPR017923	TFIIS_N	ProSiteProfiles	118	193
IPR035441	TFIIS/LEDGF_dom_sf	SUPERFAMILY	120	204
IPR035441	TFIIS/LEDGF_dom_sf	Gene3D	111	200
IPR044805	MD26A/B-like	PANTHER	2	450
IPR017923	TFIIS_N	Pfam	141	190

No CAZYmes available for this sequence

External Links

No external refs found!