LOC_Os07g46170.1

Description : rhomboid protein-related

Gene families : OG_01_0001327 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001327_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g46170.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g46170.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_388
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_71

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR035952	Rhomboid-like_sf	Gene3D	20	218
IPR013861	TMEM115/Pdh1/Rbl19	Pfam	56	154
IPR013861	TMEM115/Pdh1/Rbl19	PANTHER	17	316
IPR035952	Rhomboid-like_sf	SUPERFAMILY	26	215

No CAZYmes available for this sequence

External Links

No external refs found!