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  5. LOC_Os07g46580.1

LOC_Os07g46580.1


Description : DEA(D/H)-box RNA helicase family protein


Gene families : OG_01_0000656 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000656_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g46580.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g46580.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_310
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_210


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR014001 Helicase_ATP-bd ProSiteProfiles 14 217
IPR001650 Helicase_C Pfam 244 349
IPR027417 P-loop_NTPase SUPERFAMILY 55 367
IPR027417 P-loop_NTPase Gene3D 1 218
IPR011545 DEAD/DEAH_box_helicase_dom Pfam 135 206
IPR001650 Helicase_C SMART 268 349
IPR027417 P-loop_NTPase Gene3D 219 443
IPR001650 Helicase_C ProSiteProfiles 244 396
IPR014001 Helicase_ATP-bd SMART 2 232
IPR011545 DEAD/DEAH_box_helicase_dom Pfam 7 108

No CAZYmes available for this sequence

No external refs found!