1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os07g46620.1

LOC_Os07g46620.1


Description : transducin family protein / WD-40 repeat family protein


Gene families : OG_01_0001978 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001978_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g46620.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g46620.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_60
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_77


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR019775 WD40_repeat_CS ProSitePatterns 277 291
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 5 298
IPR017422 WDR55 PIRSF 1 353
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 226 349
IPR001680 WD40_rpt Pfam 256 290
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 4 225
IPR024977 Apc4-like_WD40_dom Pfam 13 96
IPR001680 WD40_rpt ProSiteProfiles 258 292
IPR001680 WD40_rpt SMART 124 163
IPR001680 WD40_rpt SMART 40 79
IPR001680 WD40_rpt SMART 82 121
IPR001680 WD40_rpt SMART 168 205
IPR001680 WD40_rpt SMART 250 290
IPR001680 WD40_rpt SMART 209 247

No CAZYmes available for this sequence

No external refs found!