LOC_Os07g47300.1

Description : GTP1/OBG family protein

Gene families : OG_01_0008393 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008393_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g47300.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g47300.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_147
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_152

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	ISM	GOs from InterProScan
MF	GO:0000287	magnesium ion binding	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	ISM	GOs from InterProScan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR014100	GTP-bd_Obg/CgtA	Hamap	295	621
IPR006074	GTP1-OBG_CS	ProSitePatterns	506	519
IPR006169	GTP1_OBG_dom	Pfam	298	451
IPR036726	GTP1_OBG_dom_sf	Gene3D	292	451
IPR015349	OCT_dom	TIGRFAM	662	726
IPR036346	GTP-bd_prot_GTP1/OBG_C_sf	Gene3D	658	729
IPR014100	GTP-bd_Obg/CgtA	TIGRFAM	297	620
IPR031167	G_OBG	ProSiteProfiles	453	621
IPR036346	GTP-bd_prot_GTP1/OBG_C_sf	SUPERFAMILY	656	728
IPR031167	G_OBG	CDD	453	620
IPR006073	GTP-bd	PRINTS	476	494
IPR006073	GTP-bd	PRINTS	521	539
IPR006073	GTP-bd	PRINTS	504	519
IPR006073	GTP-bd	PRINTS	455	475
IPR015349	OCT_dom	Pfam	657	726
IPR006073	GTP-bd	Pfam	454	574
IPR006169	GTP1_OBG_dom	ProSiteProfiles	294	452
IPR015349	OCT_dom	ProSiteProfiles	649	728
IPR027417	P-loop_NTPase	SUPERFAMILY	454	633
IPR036726	GTP1_OBG_dom_sf	SUPERFAMILY	297	451
IPR027417	P-loop_NTPase	Gene3D	452	633
IPR045086	OBG_GTPase	PANTHER	273	701

No CAZYmes available for this sequence

External Links

No external refs found!