Sevir.4G292200.1

Description : glycosyl hydrolase 9B5

Gene families : OG_01_0013402 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013402_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.4G292200.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.4G292200.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_171
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_298

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISM	GOs from InterProScan
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001701	Glyco_hydro_9	Pfam	52	507
IPR012341	6hp_glycosidase-like_sf	Gene3D	50	514
IPR008928	6-hairpin_glycosidase_sf	SUPERFAMILY	47	513
IPR018221	Glyco_hydro_9_His_AS	ProSitePatterns	415	441

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
GH9	418	522	3.3e-127	51	507

External Links

No external refs found!