LOC_Os07g48300.1

Description : eukaryotic translation initiation factor 2 beta subunit

Gene families : OG_01_0003747 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003747_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g48300.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g48300.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_60
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_41

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003743	translation initiation factor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006413	translational initiation	ISM	GOs from InterProScan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002735	Transl_init_fac_IF2/IF5_dom	Pfam	140	248
IPR002735	Transl_init_fac_IF2/IF5_dom	SMART	140	249
IPR016189	Transl_init_fac_IF2/IF5_N	SUPERFAMILY	115	222
IPR045196	IF2/IF5	PANTHER	1	268
IPR016190	Transl_init_fac_IF2/IF5_Zn-bd	SUPERFAMILY	219	254

No CAZYmes available for this sequence

External Links

No external refs found!