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  5. LOC_Os07g49030.2

LOC_Os07g49030.2


Description : RING/U-box protein


Gene families : OG_01_0005006 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005006_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os07g49030.2
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os07g49030.2
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_193
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_9


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001965 Znf_PHD SMART 461 506
IPR019787 Znf_PHD-finger Pfam 462 507
IPR001841 Znf_RING Pfam 368 411
IPR011011 Znf_FYVE_PHD SUPERFAMILY 438 506
IPR001841 Znf_RING ProSiteProfiles 369 411
IPR017907 Znf_RING_CS ProSitePatterns 388 397
IPR013083 Znf_RING/FYVE/PHD Gene3D 352 429
IPR019787 Znf_PHD-finger ProSiteProfiles 459 508
IPR001841 Znf_RING SMART 369 410
IPR013083 Znf_RING/FYVE/PHD Gene3D 430 509

No CAZYmes available for this sequence

No external refs found!