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  5. LOC_Os08g01290.5

LOC_Os08g01290.5


Description : tubby like protein 10


Gene families : OG_01_0008960 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008960_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g01290.5
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g01290.5
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_193
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_179


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001810 F-box_dom Pfam 61 106
IPR000007 Tubby_C PRINTS 175 191
IPR000007 Tubby_C PRINTS 429 451
IPR000007 Tubby_C PRINTS 241 268
IPR000007 Tubby_C PRINTS 191 215
IPR000007 Tubby_C PRINTS 344 361
IPR000007 Tubby_C PRINTS 362 378
IPR000007 Tubby_C PRINTS 408 427
IPR018066 Tubby_C_CS ProSitePatterns 362 375
IPR000007 Tubby_C Pfam 120 446
IPR025659 Tubby-like_C Gene3D 118 445
IPR036047 F-box-like_dom_sf SUPERFAMILY 56 103
IPR025659 Tubby-like_C SUPERFAMILY 108 451
IPR018066 Tubby_C_CS ProSitePatterns 436 451

No CAZYmes available for this sequence

No external refs found!