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  5. LOC_Os08g02330.1

LOC_Os08g02330.1


Description : CTC-interacting domain 11


Gene families : OG_01_0006338 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006338_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g02330.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g02330.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_359
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_34


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000504 RRM_dom ProSiteProfiles 117 192
IPR000504 RRM_dom SMART 215 286
IPR000504 RRM_dom SMART 118 188
IPR000504 RRM_dom Pfam 216 283
IPR000504 RRM_dom Pfam 119 181
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 93 194
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 201 297
IPR034823 CID8-like_RRM1 CDD 115 194
IPR000504 RRM_dom ProSiteProfiles 214 290
IPR035979 RBD_domain_sf SUPERFAMILY 83 190
IPR009818 Ataxin-2_C Pfam 33 46
IPR035979 RBD_domain_sf SUPERFAMILY 204 297
IPR034825 CID8-like_RRM2 CDD 210 291

No CAZYmes available for this sequence

No external refs found!