1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os08g04180.1

LOC_Os08g04180.1


Description : tryptophan synthase beta-subunit 2


Gene families : OG_01_0003993 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003993_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g04180.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g04180.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_222
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_7


Type GO Term Name Evidence Source
BP GO:0000162 tryptophan biosynthetic process ISM GOs from InterProScan
MF GO:0004834 tryptophan synthase activity ISM GOs from InterProScan
BP GO:0006568 tryptophan metabolic process ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036052 TrpB-like_PALP_sf SUPERFAMILY 76 468
IPR006654 Trp_synth_beta TIGRFAM 80 468
IPR023026 Trp_synth_beta/beta-like PIRSF 72 471
IPR023026 Trp_synth_beta/beta-like Hamap 75 469
IPR001926 TrpB-like_PALP Pfam 126 456
IPR006654 Trp_synth_beta CDD 97 464
IPR036052 TrpB-like_PALP_sf Gene3D 82 284
IPR036052 TrpB-like_PALP_sf Gene3D 127 462
IPR006653 Trp_synth_b_CS ProSitePatterns 159 173

No CAZYmes available for this sequence

No external refs found!