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  5. LOC_Os08g06450.1

LOC_Os08g06450.1


Description : phosphorylcholine cytidylyltransferase2


Gene families : OG_01_0011117 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011117_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g06450.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g06450.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_35
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_118


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0004105 choline-phosphate cytidylyltransferase activity ISM GOs from InterProScan
BP GO:0006657 CDP-choline pathway ISM GOs from InterProScan
BP GO:0009058 biosynthetic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR045049 Pcy1-like PANTHER 27 271
IPR004821 Cyt_trans-like TIGRFAM 32 99
IPR004821 Cyt_trans-like Pfam 34 163
IPR014729 Rossmann-like_a/b/a_fold Gene3D 19 247
IPR041723 CCT CDD 29 180

No CAZYmes available for this sequence

No external refs found!