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  5. LOC_Os08g09350.1

LOC_Os08g09350.1


Description : nucleolin like 2


Gene families : OG_01_0001026 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001026_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g09350.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g09350.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_109
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_85


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 394 509
IPR035979 RBD_domain_sf SUPERFAMILY 408 524
IPR000504 RRM_dom SMART 312 383
IPR000504 RRM_dom SMART 412 488
IPR034350 NUCL_RRM2 CDD 412 490
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 230 393
IPR000504 RRM_dom ProSiteProfiles 311 387
IPR034349 NUCL_RRM1 CDD 312 388
IPR035979 RBD_domain_sf SUPERFAMILY 303 408
IPR000504 RRM_dom Pfam 413 485
IPR000504 RRM_dom Pfam 313 380
IPR000504 RRM_dom ProSiteProfiles 411 492

No CAZYmes available for this sequence

No external refs found!