Sevir.4G300900.1

Description : PHYTOENE SYNTHASE

Gene families : OG_01_0000220 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000220_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.4G300900.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.4G300900.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_206
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_98

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004311	farnesyltranstransferase activity	ISM	GOs from InterProScan
MF	GO:0004659	prenyltransferase activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR044843	Trans_IPPS_bact-type	SFLD	121	400
IPR033904	Trans_IPPS_HH	CDD	125	392
IPR019845	Squalene/phytoene_synthase_CS	ProSitePatterns	278	303
IPR008949	Isoprenoid_synthase_dom_sf	SUPERFAMILY	123	405
IPR008949	Isoprenoid_synthase_dom_sf	Gene3D	115	398
IPR019845	Squalene/phytoene_synthase_CS	ProSitePatterns	242	257
IPR002060	Squ/phyt_synthse	Pfam	134	389

No CAZYmes available for this sequence

External Links

No external refs found!