1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os08g12800.1

LOC_Os08g12800.1


Description : O-Glycosyl hydrolases family 17 protein


Gene families : OG_01_0006208 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006208_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g12800.1 No neighbors in network
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g12800.1
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_87


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000490 Glyco_hydro_17 ProSitePatterns 262 275
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 29 346
IPR012946 X8 Pfam 373 443
IPR000490 Glyco_hydro_17 Pfam 29 345
IPR044965 Glyco_hydro_17_plant PANTHER 14 472
IPR012946 X8 SMART 372 456
HMM Family HMM Length Query Length e-Value Query Start Query End
CBM43 83 495 3.7e-24 373 454
GH17 311 495 1.5e-111 29 346
No external refs found!