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  5. LOC_Os08g13180.1

LOC_Os08g13180.1


Description : BTB-POZ and MATH domain 2


Gene families : OG_01_0000690 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000690_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g13180.1 No neighbors in network
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g13180.1
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_268


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0016567 protein ubiquitination ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002083 MATH/TRAF_dom CDD 27 166
IPR000210 BTB/POZ_dom SMART 209 316
IPR008974 TRAF-like Gene3D 25 170
IPR002083 MATH/TRAF_dom ProSiteProfiles 26 165
IPR002083 MATH/TRAF_dom SMART 31 148
IPR045005 BPM1-6 PANTHER 2 375
IPR000210 BTB/POZ_dom ProSiteProfiles 209 276
IPR011333 SKP1/BTB/POZ_sf SUPERFAMILY 186 313
IPR011333 SKP1/BTB/POZ_sf Gene3D 185 311
IPR000210 BTB/POZ_dom Pfam 201 315

No CAZYmes available for this sequence

No external refs found!