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  5. LOC_Os08g13640.1

LOC_Os08g13640.1


Description : ankyrin repeat family protein


Gene families : OG_01_0013271 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013271_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g13640.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g13640.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_150
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_106


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 258 371
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 25 215
IPR019734 TPR_repeat ProSiteProfiles 259 292
IPR002110 Ankyrin_rpt Pfam 67 157
IPR002110 Ankyrin_rpt SMART 62 92
IPR002110 Ankyrin_rpt SMART 182 216
IPR002110 Ankyrin_rpt SMART 129 158
IPR002110 Ankyrin_rpt SMART 96 125
IPR002110 Ankyrin_rpt PRINTS 167 181
IPR002110 Ankyrin_rpt PRINTS 130 145
IPR019734 TPR_repeat ProSiteProfiles 327 360
IPR036770 Ankyrin_rpt-contain_sf Gene3D 161 219
IPR036770 Ankyrin_rpt-contain_sf Gene3D 4 160
IPR019734 TPR_repeat SMART 259 292
IPR019734 TPR_repeat SMART 327 360
IPR019734 TPR_repeat SMART 293 326
IPR011990 TPR-like_helical_dom_sf Gene3D 256 372
IPR002110 Ankyrin_rpt ProSiteProfiles 96 128
IPR002110 Ankyrin_rpt ProSiteProfiles 129 161

No CAZYmes available for this sequence

No external refs found!