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  5. Sevir.4G302000.1

Sevir.4G302000.1


Description : photosystem II stability/assembly factor, chloroplast (HCF136)


Gene families : OG_01_0012710 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012710_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.4G302000.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.4G302000.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_206
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_107


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR016705 Ycf48/Hcf136 PIRSF 40 395
IPR028203 PSII_CF48-like_dom Pfam 73 393
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 60 266
IPR019546 TAT_signal_bac_arc TIGRFAM 39 68
IPR006311 TAT_signal ProSiteProfiles 1 68

No CAZYmes available for this sequence

No external refs found!