1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os08g15460.1

LOC_Os08g15460.1


Description : SECY homolog 1


Gene families : OG_01_0011556 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011556_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g15460.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g15460.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_147
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_159


Type GO Term Name Evidence Source
BP GO:0015031 protein transport ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR023201 SecY_dom_sf Gene3D 138 543
IPR030659 SecY_CS ProSitePatterns 198 217
IPR002208 SecY/SEC61-alpha PANTHER 65 552
IPR023201 SecY_dom_sf SUPERFAMILY 139 537
IPR002208 SecY/SEC61-alpha Pfam 199 530
IPR030659 SecY_CS ProSitePatterns 290 307
IPR002208 SecY/SEC61-alpha TIGRFAM 146 543
IPR026593 SecY Hamap 135 547

No CAZYmes available for this sequence

No external refs found!