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  5. LOC_Os08g18110.1

LOC_Os08g18110.1


Description : alpha-soluble NSF attachment protein 2


Gene families : OG_01_0015836 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015836_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g18110.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g18110.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_267
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_60


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0006886 intracellular protein transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000744 NSF_attach CDD 7 276
IPR000744 NSF_attach PANTHER 1 289
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 9 284
IPR011990 TPR-like_helical_dom_sf Gene3D 8 285
IPR000744 NSF_attach PRINTS 91 108
IPR000744 NSF_attach PRINTS 152 175
IPR000744 NSF_attach PRINTS 224 244
IPR000744 NSF_attach PRINTS 183 202
IPR000744 NSF_attach PRINTS 255 275
IPR000744 NSF_attach PRINTS 28 47
IPR019734 TPR_repeat SMART 53 86
IPR019734 TPR_repeat SMART 112 145

No CAZYmes available for this sequence

No external refs found!